LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-149-3p


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Filters

Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
206396-206415
0.015
1
9mer
149992-150014
0.014
6
8mer
159067-159091
0.011
1
9mer
91772-91795
0.011
2
8mer
22098-22123
0.009
7
8mer
5873-5896
0.009
1
8mer
150911-150935
0.008
Not Conserved
8mer
130156-130173
0.007
1
9mer
204695-204711
0.006
1
7mer
4662-4667
0.006
1
8mer
183613-183631
0.006
1
8mer
69576-69590
0.006
1
8mer
38674-38696
0.006
0
8mer
9338-9357
0.006
2
7mer
148795-148819
0.006
1
7mer
165742-165761
0.005
1
7mer
159677-159694
0.005
2
8mer
143725-143748
0.005
1
7mer
22229-22242
0.004
6
7mer
210824-210834
0.004
1
8mer
255222-255240
0.004
0
8mer
52875-52898
0.004
1
7mer
205829-205846
0.004
0
7mer
182609-182621
0.004
5
8mer
265659-265680
0.004
3
8mer
101592-101610
0.004
3
8mer
123335-123350
0.003
3
7mer
138983-139001
0.003
2
7mer
8166-8183
0.003
2
7mer
139989-140006
0.003
0
8mer+mismatch
53382-53401
0.003
4
8mer
204913-204932
0.003
0
7mer
129923-129943
0.003
1
9mer
195278-195297
0.003
0
7mer
219202-219219
0.003
0
7mer
10406-10423
0.003
6
8mer
120893-120909
0.003
1
7mer
74941-74961
0.003
2
7mer
183057-183077
0.002
2
6mer
208873-208895
0.002
5
7mer
93085-93110
0.002
3
6mer
150405-150425
0.002
4
9mer
258930-258956
0.002
0
8mer
241440-241461
0.002
1
7mer
59149-59161
0.002
0
7mer
98511-98522
0.002
1
6mer
188462-188482
0.002
1
6mer
156650-156670
0.002
1
6mer
244154-244179
0.002
1
8mer
218879-218900
0.002
1
8mer
54097-54122
0.002
1
7mer
209942-209964
0.002
1
6mer
24226-24239
0.002
1
6mer
128647-128671
0.002
4
8mer
195271-195293
0.002
Not Conserved
8mer
3573-3586
0.002
0
7mer
112383-112406
0.002
0
8mer
265451-265471
0.002
0
7mer
74463-74474
0.002
4
6mer
48242-48266
0.002
4
7mer
12981-13000
0.002
3
8mer
205143-205158
0.002
0
7mer
163421-163441
0.002
2
7mer
238881-238901
0.002
0
6mer
86720-86746
0.002
1
6mer
119733-119749
0.002
8
7mer
59558-59575
0.002
1
6mer
29764-29785
0.002
1
6mer
163773-163788
0.002
4
6mer
95565-95580
0.002
2
6mer
123853-123870
0.002
3
6mer
18074-18088
0.002
1
6mer
42878-42902
0.002
1
6mer
92588-92601
0.002
0
6mer
29003-29018
0.002
2
7mer
204352-204370
0.002
0
6mer
265633-265647
0.002
1
6mer
203337-203359
0.002
1
6mer
177131-177147
0.002
1
6mer
216698-216708
0.002
1
6mer
199281-199300
0.002
0
6mer
42068-42094
0.002
1
6mer
229013-229024
0.002
1
6mer
65975-65997
0.002
0
6mer
261266-261280
0.001
1
6mer
137989-138005
0.001
0
7mer
253807-253833
0.001
1
6mer
253982-253998
0.001
1
6mer
132593-132613
0.001
0
6mer
106281-106297
0.001
1
6mer
227245-227261
0.001
0
6mer
108812-108828
0.001
1
7mer
119980-119998
0.001
7
7mer
132380-132402
0.001
2
6mer
133208-133224
0.001
1
6mer
111049-111066
0.001
0
6mer
243809-243825
0.001
1
6mer
104885-104902
0.001
1
7mer
215835-215862
0.001
1
6mer
117840-117856
0.001
1
6mer
129745-129761
0.001
1
7mer
241492-241514
0.001
0
7mer
119520-119538
0.001
5
6mer
131299-131324
0.001
1
7mer
92800-92817
0.001
0
6mer
252606-252628
0.001
1
6mer
134755-134777
0.001
1
6mer
228720-228742
0.001
0
6mer
64231-64247
0.001
1
6mer
158371-158388
0.001
1
6mer
145749-145769
0.001
1
6mer
174192-174214
0.001
1
6mer
213973-213992
0.001
4
6mer
238689-238712
0.001
1
8mer
143089-143114
0.001
1
6mer
44537-44556
0.001
1
6mer
72015-72032
0.001
0
6mer
264260-264280
0.001
0
6mer
10319-10334
0.001
0
6mer
63571-63593
0.001
1
8mer
143102-143117
0.001
1
6mer
41595-41617
0.001
1
6mer
27341-27363
0.001
0
6mer
84364-84389
0.001
1
6mer
151477-151495
0.001
3
6mer
244597-244615
0.001
0
6mer
233084-233103
0.001
1
6mer
81556-81580
0.001
1
6mer
233856-233873
0.001
1
6mer
265963-265982
0.001
1
6mer
255388-255410
0.001
1
6mer
252403-252418
0.001
3
6mer
194394-194416
0.001
1
6mer
79810-79830
0.001
0
6mer
199911-199932
0.001
0
6mer
138131-138148
0.001
0
6mer
233419-233435
0.001
1
6mer
71514-71531
0.001
1
6mer
226187-226203
0.001
0
6mer
108238-108256
0.001
Not Conserved
6mer
181851-181876
0.001
0
6mer
2247-2269
0.001
1
6mer
127840-127863
0.001
0
6mer
53500-53524
0.001
1
6mer
17879-17901
0.001
1
6mer
1157-1182
0.001
1
6mer
170023-170039
0.001
0
6mer
82557-82577
0.001
1
6mer
152077-152102
0.001
1
6mer
219064-219086
0.001
0
6mer
180385-180398
0.001
0
6mer
247092-247114
0.001
0
6mer
247233-247249
0.001
0
6mer
31012-31037
0.001
1
6mer
105622-105638
0.001
1
7mer
258914-258936
0.001
0
6mer
134405-134424
0.001
1
6mer
164665-164682
0.001
0
6mer
262651-262668
0.001
0
6mer
28506-28529
0.001
1
6mer
80043-80066
0.001
0
6mer
133910-133926
0.001
1
7mer
241435-241458
0.001
1
6mer
55241-55264
0.001
0
6mer
169589-169606
0.001
0
6mer
158202-158220
0.001
1
6mer
159299-159323
0.001
0
6mer
89796-89810
0.001
0
6mer
263742-263761
0.001
Not Conserved
6mer
44663-44682
0.001
1
6mer
207248-207266
0.001
5
6mer
152812-152833
0.001
1
6mer
138810-138820
0.001
0
7mer
220098-220119
0.001
2
7mer
105733-105753
0.001
1
6mer
136603-136619
0.001
1
9mer
258924-258940
0.001
0
6mer
223401-223417
0.001
1
7mer
265679-265701
0.001
3
6mer
156805-156821
0.001
1
7mer
265463-265480
0.001
4
6mer
63715-63731
0.001
1
6mer
90469-90487
0.001
1
6mer
51217-51236
0.001
1
6mer
138445-138468
0.001
0
6mer
165051-165068
0.001
0
6mer
100772-100797
0.001
2
6mer
95024-95040
0.001
1
6mer
164895-164922
0.001
0
7mer
120122-120138
0.001
1
6mer
142162-142184
0.001
1
6mer
205134-205155
0.001
2
6mer
137637-137656
0.001
1
6mer
162112-162130
0.001
0
6mer
204182-204205
0.001
0
6mer
245044-245063
0.001
0
6mer
208344-208363
0.001
0
6mer
113518-113528
0.001
1
6mer
70967-70992
0.001
0
6mer
55153-55167
0.001
0
6mer
176271-176287
0.001
1
6mer
161015-161031
0.001
1
6mer
247551-247574
0.001
0
6mer
89882-89905
0.001
0
6mer
36924-36940
0.001
1
6mer
65818-65834
0.001
0
6mer
156743-156761
0.001
0
6mer
41749-41766
0.001
1
6mer
115519-115535
0.001
1
8mer
143750-143769
0.001
2
6mer
259419-259439
0.001
1
6mer
65664-65686
0.001
0
6mer
139819-139837
0.001
1
6mer
170147-170172
0.001
1
7mer
201746-201765
0.001
Not Conserved
7mer
109962-109983
0.001
Not Conserved
6mer
70824-70847
0.001
0
6mer
199787-199811
0.001
Not Conserved
6mer
218627-218651
0.001
1
6mer
252742-252764
0.001
1
6mer
243275-243298
0.001
0
6mer
126143-126159
0.001
1
6mer
224162-224180
0.001
1
6mer
111271-111285
0.001
1
6mer
184323-184338
0.001
1
6mer
218497-218513
0.001
1
6mer
112821-112831
0.001
0
6mer
227380-227396
0.001
1
7mer
78847-78865
0.001
0
6mer
226001-226025
0.001
1
6mer
134897-134911
0.001
1
7mer
109957-109971
0.001
0
6mer
219976-219992
0.001
Not Conserved
6mer
91401-91411
0.001
1
7mer
130059-130079
0.001
0
6mer
43028-43038
0.001
0
6mer
91361-91379
0.001
1
6mer
244756-244770
0.001
0
6mer
157608-157623
0.001
1
6mer
91530-91546
0.001
1
6mer
223635-223654
0.001
0
6mer
125975-125993
0.001
0
6mer
68654-68675
0.001
4
6mer
222400-222417
0.001
1
6mer
70666-70680
0.001
Not Conserved
6mer
169424-169442
0.001
0
6mer
84282-84294
0.001
1
6mer
263758-263774
0.001
0
6mer
123323-123347
0.001
1
6mer
205964-205980
0.001
0
7mer
143591-143609
0.001
1
6mer
43843-43868
0.001
Not Conserved
6mer
157439-157457
0.001
1
6mer
18191-18211
0.001
1
6mer
255518-255534
0.001
1
6mer
80543-80561
0.001
0
6mer
159751-159770
0.001
Not Conserved
6mer
130013-130030
0.001
Not Conserved
6mer
134522-134539
0.001
1
6mer
105743-105765
0.001
1
6mer
63584-63606
0.001
1
6mer
233251-233269
0.001
1
6mer
97122-97140
0.001
1
6mer
129938-129955
0.001
1
6mer
80710-80727
0.001
1
6mer
252906-252932
0.001
1
6mer
134584-134595
0.001
1
6mer
176091-176112
0.001
1
6mer
178663-178681
0.001
1
6mer
74564-74584
0.001
4
6mer
133775-133791
0.001
1
6mer
115362-115380
0.001
1
6mer
127667-127685
0.001
0
6mer
80571-80593
0.001
0
6mer
112676-112698
0.001
0
6mer
126009-126025
0.001
1
6mer
24659-24673
0.001
Not Conserved
6mer
157475-157489
0.001
1
6mer
115390-115412
0.001
0
6mer
178816-178835
0.001
0
7mer
68690-68712
0.001
1
6mer
112643-112666
0.001
Not Conserved
6mer
239769-239789
0.001
1
6mer
130076-130091
0.001
1
6mer
194535-194551
0.001
0
6mer
77633-77648
0.001
0
6mer
64060-64078
0.001
0
6mer
77658-77680
0.001
0
6mer
76090-76105
0.001
0
6mer
77798-77814
0.001
0
6mer
164497-164515
0.001
0
6mer
131140-131158
0.000
1
6mer
41608-41630
0.000
1
6mer
178516-178542
0.000
Not Conserved
6mer
110087-110103
0.000
0
6mer
178826-178848
0.000
1
6mer
27481-27497
0.000
0
6mer
243116-243134
0.000
Not Conserved
7mer
3588-3605
0.000
0
6mer
133741-133759
0.000
0
6mer
44673-44695
0.000
0
6mer
247414-247439
0.000
0
6mer
218327-218345
0.000
0
6mer
152093-152115
0.000
1
6mer
97156-97172
0.000
0
6mer
18214-18224
0.000
1
6mer
178680-178700
0.000
0
6mer
247393-247407
0.000
Not Conserved
6mer
164522-164547
0.000
0
6mer
134415-134437
0.000
1
6mer
148831-148844
0.000
Not Conserved
6mer
51229-51249
0.000
0
6mer
43856-43881
0.000
1
6mer
62280-62298
0.000
0
6mer
110056-110071
0.000
1
6mer
70676-70699
0.000
1
6mer
119853-119870
0.000
0
8mer
117863-117888
0.000
Not Conserved
6mer
218355-218377
0.000
0
6mer
258930-258952
0.000
0
6mer
13007-13026
0.000
0
6mer
143820-143842
0.000
3
7mer
3575-3593
0.000
Not Conserved
6mer
3584-3599
0.000
Not Conserved
6mer
143791-143813
0.000
1
6mer
12999-13014
0.000
1
LA16c-358B7.4
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000339021
Biotype: antisense
Gene id: ENSG00000274751
Gene Name: LA16c-358B7.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3130-3151
0.021
0
9mer
3153-3173
0.020
Not Conserved
9mer
2961-2979
0.011
0
9mer
2180-2198
0.009
0
9mer
3109-3127
0.008
Not Conserved
9mer
3005-3031
0.008
Not Conserved
9mer
2923-2941
0.007
Not Conserved
9mer
3069-3087
0.007
Not Conserved
9mer
3089-3111
0.007
Not Conserved
9mer
2903-2921
0.007
Not Conserved
9mer
2851-2877
0.007
Not Conserved
9mer
2831-2849
0.007
Not Conserved
9mer
2735-2753
0.007
Not Conserved
9mer
2867-2885
0.007
Not Conserved
9mer
2100-2118
0.007
1
9mer
2887-2913
0.006
Not Conserved
9mer
2527-2545
0.006
Not Conserved
9mer
2412-2430
0.006
Not Conserved
9mer
2603-2625
0.006
Not Conserved
9mer
2492-2517
0.005
Not Conserved
9mer
2472-2494
0.005
Not Conserved
6mer
3468-3493
0.005
2
9mer
1984-2010
0.005
1
9mer
2392-2410
0.005
Not Conserved
9mer
2048-2066
0.005
1
9mer
2084-2110
0.005
1
9mer
2679-2697
0.005
Not Conserved
9mer
2663-2689
0.005
Not Conserved
9mer
2068-2094
0.005
1
9mer
2703-2729
0.004
Not Conserved
9mer
2008-2026
0.004
Not Conserved
9mer
2567-2585
0.003
Not Conserved
9mer
2220-2246
0.003
Not Conserved
9mer
2336-2362
0.003
Not Conserved
9mer
2452-2470
0.003
Not Conserved
8mer
2372-2386
0.003
Not Conserved
9mer
2200-2218
0.002
Not Conserved
9mer
1944-1962
0.002
1
6mer
753-769
0.002
1
9mer
2128-2154
0.002
Not Conserved
9mer
2316-2334
0.002
Not Conserved
9mer
2436-2454
0.002
Not Conserved
7mer
2508-2525
0.002
Not Conserved
9mer
2140-2158
0.002
0
7mer
2028-2046
0.001
0
7mer
2260-2278
0.001
Not Conserved
6mer
660-675
0.001
1
6mer
1507-1529
0.001
1
7mer
2144-2166
0.001
0
7mer
2244-2262
0.001
Not Conserved
7mer
3361-3382
0.001
0
7mer
2352-2366
0.001
0
6mer
1788-1807
0.001
1
6mer
1372-1388
0.001
1
6mer
1917-1938
0.000
1
XLOC_009222
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019399
Biotype: transcript isomorph
Gene id: XLOC_009222
Gene Name: XLOC_009222
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
29-45
0.106
0
8mer
2043-2060
0.042
0
6mer
6086-6101
0.017
0
7mer
2575-2595
0.010
0
6mer
5338-5358
0.008
0
6mer
5178-5201
0.008
0
6mer
2711-2728
0.006
0
6mer
3454-3469
0.006
0
6mer
3128-3146
0.005
0
6mer
2920-2938
0.004
0
6mer
6117-6133
0.003
Not Conserved
8mer
2837-2862
0.001
Not Conserved
CTD-3051D23.1
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556430
Biotype: lincRNA
Gene id: ENSG00000258811
Gene Name: CTD-3051D23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2969-2994
0.093
1
8mer
3112-3124
0.025
0
7mer
841-855
0.010
1
7mer
3169-3179
0.009
0
7mer
2191-2210
0.008
1
7mer
1163-1181
0.006
1
6mer
1896-1921
0.003
1
7mer
2842-2859
0.003
0
7mer
1253-1274
0.003
1
6mer
415-440
0.002
0
8mer+wobble
895-912
0.002
0
6mer
1205-1230
0.002
1
6mer
1509-1531
0.001
0
9mer
907-926
0.001
Not Conserved
6mer
1279-1295
0.001
1
6mer
1379-1399
0.001
0
7mer
1253-1269
0.001
Not Conserved
6mer
1245-1264
0.000
Not Conserved
LOC100190986
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: NR_024456.1
Biotype: sense
Gene id: NR_024456.1 (gene)
Gene Name: LOC100190986
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2332-2346
0.067
0
8mer
1694-1714
0.043
0
7mer
343-366
0.022
0
6mer
2198-2220
0.016
0
6mer
550-566
0.010
0
6mer
718-733
0.007
0
6mer
686-708
0.006
0
6mer
2364-2378
0.001
Not Conserved
CTD-3224K15.2
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000514287
Biotype: lincRNA
Gene id: ENSG00000250635
Gene Name: CTD-3224K15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
53-69
0.151
5
8mer+wobble
32-48
0.007
5
AC006548.28
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30939-30963
0.017
1
9mer
65438-65458
0.007
1
7mer
16900-16922
0.006
1
8mer
80056-80080
0.006
0
7mer
49283-49296
0.005
Not Conserved
7mer
49081-49103
0.005
Not Conserved
7mer
44583-44598
0.005
0
8mer
52608-52632
0.005
Not Conserved
8mer
63328-63346
0.004
1
9mer
30890-30917
0.004
1
6mer
178-198
0.004
1
8mer
57426-57444
0.003
0
7mer
3350-3372
0.003
4
8mer
1933-1951
0.003
1
8mer
57520-57540
0.003
0
7mer
59241-59263
0.002
1
7mer
19681-19698
0.002
0
8mer
39629-39655
0.002
1
6mer
74039-74055
0.002
1
7mer
83016-83040
0.002
1
8mer
62228-62254
0.002
1
7mer
60518-60539
0.002
0
6mer
2762-2781
0.002
2
6mer
25108-25132
0.002
1
8mer
6637-6657
0.002
0
8mer
74426-74444
0.002
Not Conserved
6mer
7018-7044
0.002
1
6mer
21003-21023
0.002
1
7mer
58179-58204
0.002
0
6mer
14753-14774
0.002
3
6mer
13233-13252
0.002
1
7mer
63054-63074
0.002
1
6mer
32110-32129
0.002
1
6mer
17495-17508
0.001
1
6mer
7727-7742
0.001
3
6mer
69353-69375
0.001
Not Conserved
6mer
2406-2422
0.001
1
6mer
69986-70009
0.001
0
8mer
57380-57401
0.001
0
7mer
17485-17507
0.001
1
8mer
57473-57494
0.001
0
6mer
9864-9882
0.001
1
6mer
46268-46281
0.001
Not Conserved
7mer
58003-58021
0.001
1
7mer
74447-74473
0.001
0
6mer
70591-70611
0.001
Not Conserved
6mer
10039-10049
0.001
3
6mer
24327-24351
0.001
0
7mer
20165-20183
0.001
2
6mer
58448-58474
0.001
1
6mer
9006-9031
0.001
Not Conserved
6mer
63853-63870
0.001
0
6mer
19907-19933
0.001
1
6mer
16729-16741
0.001
1
6mer
59976-59996
0.001
1
6mer
59689-59714
0.001
1
6mer
16584-16607
0.001
1
6mer
8872-8895
0.001
Not Conserved
6mer
21192-21218
0.001
0
6mer
7458-7475
0.001
1
6mer
18111-18135
0.001
2
6mer
38002-38027
0.001
1
6mer
5160-5177
0.001
1
6mer
65212-65237
0.001
1
6mer
16804-16822
0.001
0
6mer
16688-16715
0.001
1
6mer
61719-61745
0.001
1
6mer
5786-5812
0.001
0
6mer
12667-12687
0.001
0
6mer
7665-7684
0.001
1
6mer
59590-59607
0.001
1
6mer
72000-72016
0.001
Not Conserved
6mer
4242-4263
0.000
1
6mer
72137-72157
0.000
Not Conserved
6mer
36344-36369
0.000
1
6mer
72169-72194
0.000
Not Conserved
6mer
59649-59668
0.000
1
6mer
16576-16588
0.000
1
7mer
80049-80061
0.000
0
6mer
63314-63337
0.000
1
6mer
58149-58168
0.000
1
6mer
74429-74454
0.000
Not Conserved
RP11-27P7.1
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000531077
Biotype: lincRNA
Gene id: ENSG00000254775
Gene Name: RP11-27P7.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
376-394
0.149
5
6mer
10-29
0.003
1
XLOC_006814
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014725
Biotype: transcript isomorph
Gene id: XLOC_006814
Gene Name: XLOC_006814
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
304-322
0.116
5
9mer
517-535
0.026
1
7mer
517-531
0.007
1
6mer
216-235
0.003
1
RP11-403B2.6
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000559621
Biotype: lincRNA
Gene id: ENSG00000259383
Gene Name: RP11-403B2.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
207-228
0.146
0
RP3-323A16.1
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3979-4003
0.024
1
7mer
149-163
0.018
0
7mer
449-466
0.008
1
7mer
8131-8144
0.007
0
7mer
38412-38430
0.007
1
7mer
8323-8345
0.006
0
7mer
42852-42869
0.005
1
7mer
15882-15902
0.005
2
7mer
53424-53448
0.004
2
7mer
48803-48828
0.004
0
7mer
41290-41312
0.003
1
6mer
37070-37086
0.002
9
6mer
17913-17934
0.002
1
6mer
113-131
0.002
1
6mer
50431-50446
0.002
1
6mer
19776-19802
0.002
3
6mer
31831-31855
0.002
2
6mer
36930-36948
0.002
3
7mer
37423-37437
0.002
2
6mer
13905-13919
0.002
4
6mer
29650-29676
0.002
0
6mer
13026-13045
0.002
1
8mer
4027-4053
0.002
0
8mer
38164-38184
0.001
0
6mer
5395-5411
0.001
0
6mer
53033-53052
0.001
0
6mer
30524-30547
0.001
1
7mer
2372-2398
0.001
Not Conserved
7mer
11349-11362
0.001
1
6mer
21626-21648
0.001
0
6mer
280-298
0.001
0
6mer
3744-3769
0.001
1
6mer
43689-43712
0.001
0
6mer
33600-33625
0.001
0
9mer
11939-11963
0.001
0
6mer
38161-38181
0.001
0
6mer
30957-30971
0.001
Not Conserved
6mer
17590-17605
0.001
0
6mer
33320-33345
0.001
0
6mer
50146-50169
0.001
0
6mer
48429-48453
0.001
1
6mer
21764-21781
0.001
1
6mer
45752-45777
0.001
1
6mer
1831-1856
0.001
1
6mer
45059-45068
0.001
Not Conserved
6mer
11934-11959
0.001
1
6mer
21922-21943
0.001
Not Conserved
6mer
45373-45394
0.001
1
6mer
43527-43545
0.001
0
6mer
11157-11175
0.001
1
6mer
19020-19037
0.001
0
6mer
44428-44442
0.001
0
8mer
36949-36966
0.001
2
6mer
23854-23878
0.000
Not Conserved
6mer
43552-43577
0.000
0
6mer
48484-48507
0.000
1
RP11-46H11.3
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000503695
Biotype: lincRNA
Gene id: ENSG00000250790
Gene Name: RP11-46H11.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
367-391
0.069
0
8mer
462-482
0.055
0
6mer
2048-2073
0.006
0
6mer
1751-1767
0.005
0
6mer
1892-1907
0.004
0
6mer
1917-1939
0.003
0
LINC00665
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590657
Biotype: lincRNA
Gene id: ENSG00000232677
Gene Name: LINC00665
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2164-2183
0.070
1
7mer
2416-2434
0.023
1
6mer
447-464
0.012
1
6mer
605-620
0.011
1
6mer
2167-2192
0.010
1
6mer
1181-1197
0.008
1
6mer
2132-2149
0.005
0
LOC729732
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_047662.2
Biotype: lincRNA
Gene id: NR_047662.2 (gene)
Gene Name: LOC729732
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
108-131
0.069
0
8mer
3779-3793
0.032
0
8mer
2775-2794
0.013
0
8mer
2466-2480
0.012
0
6mer
93-119
0.007
0
6mer
111-131
0.005
0
XLOC_013012
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026954
Biotype: transcript isomorph
Gene id: XLOC_013012
Gene Name: XLOC_013012
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
903-915
0.099
1
7mer
600-615
0.028
1
6mer
588-610
0.011
1
RP11-54G14.1
hsa-miR-149-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000613153
Biotype: lincRNA
Gene id: ENSG00000274918
Gene Name: RP11-54G14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
54-73
0.078
0
7mer
150-167
0.027
0
6mer
15-32
0.023
1
6mer
135-154
0.007
0
XLOC_014159
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029516
Biotype: transcript isomorph
Gene id: XLOC_014159
Gene Name: XLOC_014159
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
479-497
0.019
1
9mer
352-376
0.014
Not Conserved
8mer
270-292
0.013
1
9mer
526-542
0.013
0
9mer
429-451
0.011
1
9mer
580-603
0.011
1
8mer
457-475
0.009
1
7mer
285-308
0.009
1
9mer
548-571
0.008
0
7mer
586-599
0.005
1
7mer
414-431
0.005
0
9mer
650-668
0.005
1
6mer
2483-2507
0.004
1
7mer
505-522
0.003
0
6mer
270-289
0.003
1
8mer+wobble
672-688
0.001
1
RP11-340I6.7
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000596569
Biotype: lincRNA
Gene id: ENSG00000236299
Gene Name: RP11-340I6.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
643-661
0.113
0
6mer
525-547
0.011
0
6mer
692-713
0.011
0
CERS6-AS1
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000594898
Biotype: antisense
Gene id: ENSG00000227617
Gene Name: CERS6-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
52-70
0.118
1
6mer
353-375
0.015
1
XLOC_009631
hsa-miR-149-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020230
Biotype: transcript isomorph
Gene id: XLOC_009631
Gene Name: XLOC_009631
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Thyroid Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-149-3p
Sequence: agggagggacgggggcugugc
MirBase ID: MIMAT0004609
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3939-3962
0.098
2
7mer
112-138
0.010
0
7mer
3321-3343
0.004
1
6mer
254-271
0.003
1
6mer
3406-3424
0.003
1
6mer
80-105
0.003
0
8mer+mismatch
3547-3564
0.002
1
6mer
3570-3587
0.002
Not Conserved
6mer
2873-2889
0.001
1
6mer
1638-1657
0.001
1
6mer
2547-2564
0.001
0
6mer
2742-2756
0.001
0
6mer
2706-2725
0.001
0
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